Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 AL135744.1-201ENST00000565098 629 ntBASIC14.85□□□□□ -0.03
ZNF550Q7Z398 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.85□□□□□ -0.03
ZNF550Q7Z398 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZNF550Q7Z398 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 AL138918.1-201ENST00000568306 659 ntBASIC14.84□□□□□ -0.03
ZNF550Q7Z398 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 AC027307.2-201ENST00000591252 911 ntBASIC14.84□□□□□ -0.03
ZNF550Q7Z398 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 AC106028.4-201ENST00000614509 607 ntBASIC14.84□□□□□ -0.03
ZNF550Q7Z398 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 AC105917.1-201ENST00000506637 2539 ntBASIC14.84□□□□□ -0.03
ZNF550Q7Z398 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF550Q7Z398 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF550Q7Z398 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
ZNF550Q7Z398 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.83□□□□□ -0.03
ZNF550Q7Z398 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF550Q7Z398 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.83□□□□□ -0.03
ZNF550Q7Z398 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.83□□□□□ -0.03
ZNF550Q7Z398 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF550Q7Z398 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms