Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 AL590787.1-201ENST00000568856 1315 ntBASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00299Q6ZSB3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MIR662-201ENST00000384847 95 ntBASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 FAM8A6P-201ENST00000407496 1135 ntBASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 LINC00982-205ENST00000420957 435 ntBASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 AL020989.1-201ENST00000422979 469 ntBASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00299Q6ZSB3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 AC127383.1-201ENST00000444697 1800 ntBASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 EGLN1P1-201ENST00000531623 762 ntBASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00299Q6ZSB3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00299Q6ZSB3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LINC00299Q6ZSB3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00299Q6ZSB3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00299Q6ZSB3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00299Q6ZSB3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms