Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXR1Q6PIV2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AC016027.1-202ENST00000607927 1699 ntBASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 CRYGEP-201ENST00000412192 528 ntBASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 KRT18P28-201ENST00000453838 1332 ntBASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 AC006449.6-201ENST00000612330 2296 ntBASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXR1Q6PIV2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AC018845.2-201ENST00000568326 409 ntBASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AC005829.1-201ENST00000570002 483 ntBASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXR1Q6PIV2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms