Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 UBALD1-205ENST00000590891 2641 ntBASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 AL022328.3-201ENST00000607943 679 ntBASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 AL607033.1-201ENST00000623900 1599 ntBASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNKSR3Q6P9H4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
CNKSR3Q6P9H4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AP001582.1-201ENST00000525856 295 ntBASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AC107373.2-201ENST00000607735 490 ntBASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNKSR3Q6P9H4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 AC006001.1-201ENST00000325130 474 ntBASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 Z93015.1-201ENST00000451718 390 ntBASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 AP001258.2-201ENST00000529891 490 ntBASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CNKSR3Q6P9H4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CNKSR3Q6P9H4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms