Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 MRPL20P1-201ENST00000400819 433 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AC026396.1-201ENST00000419388 421 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AC098831.1-202ENST00000438821 336 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 IGHV3-65-201ENST00000523210 341 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AL049840.3-201ENST00000602669 611 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AC117500.6-201ENST00000624871 588 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 HLA-A-201ENST00000376802 1334 ntBASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM53Q6P2H8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 AC087163.2-201ENST00000457299 853 ntBASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 COL6A4P2-202ENST00000504443 2753 ntBASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEM53Q6P2H8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TMEM53Q6P2H8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms