Protein–RNA interactions for Protein: Q5T4F4

ZFYVE27, Protrudin, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE27Q5T4F4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 MIR3909-201ENST00000579518 119 ntBASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 AC004877.2-201ENST00000623941 599 ntBASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZFYVE27Q5T4F4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 RPL13AP23-201ENST00000480739 586 ntBASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 AL009183.1-201ENST00000603760 355 ntBASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZFYVE27Q5T4F4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 AL592424.1-201ENST00000563624 1536 ntBASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 RHOQP3-201ENST00000437982 621 ntBASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZFYVE27Q5T4F4 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms