Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO4Q2I0M5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RSPO4Q2I0M5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RSPO4Q2I0M5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RSPO4Q2I0M5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RSPO4Q2I0M5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RSPO4Q2I0M5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 Z97180.1-201ENST00000445173 988 ntBASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 CYP4F24P-201ENST00000586049 1580 ntBASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RSPO4Q2I0M5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 KRT8P39-201ENST00000396270 1433 ntBASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 AL645608.8-201ENST00000606034 2086 ntBASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 SPTLC1P5-201ENST00000450718 252 ntBASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 AC126915.1-201ENST00000522847 1038 ntBASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.44■□□□□ 0.06
RSPO4Q2I0M5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 MIR1202-201ENST00000408529 83 ntBASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 POM121L10P-201ENST00000436994 1285 ntBASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 AC138649.2-201ENST00000615886 705 ntBASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RSPO4Q2I0M5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms