Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.01□□□□□ -0.01
CD47Q08722 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
CD47Q08722 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD47Q08722 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD47Q08722 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 POR-201ENST00000394893 2532 ntTSL 5 BASIC15□□□□□ -0.01
CD47Q08722 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 CICP23-201ENST00000605013 2741 ntBASIC15□□□□□ -0.01
CD47Q08722 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 RPS2P28-201ENST00000314255 741 ntBASIC15□□□□□ -0.01
CD47Q08722 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 KRT18P67-201ENST00000432816 1264 ntBASIC15□□□□□ -0.01
CD47Q08722 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD47Q08722 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15□□□□□ -0.01
CD47Q08722 GGTLC5P-201ENST00000617623 998 ntBASIC15□□□□□ -0.01
CD47Q08722 AL691432.3-201ENST00000621860 400 ntBASIC15□□□□□ -0.01
CD47Q08722 AC008735.5-201ENST00000623544 497 ntBASIC15□□□□□ -0.01
CD47Q08722 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15□□□□□ -0.01
CD47Q08722 AL592424.1-201ENST00000563624 1536 ntBASIC15□□□□□ -0.01
CD47Q08722 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD47Q08722 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
CD47Q08722 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15□□□□□ -0.01
CD47Q08722 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD47Q08722 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CD47Q08722 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15□□□□□ -0.01
CD47Q08722 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 LINC01101-201ENST00000622953 1884 ntBASIC14.99□□□□□ -0.01
CD47Q08722 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CD47Q08722 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.99□□□□□ -0.01
CD47Q08722 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 AL450487.1-201ENST00000426799 995 ntBASIC14.99□□□□□ -0.01
CD47Q08722 KRT18P27-201ENST00000427733 1299 ntBASIC14.99□□□□□ -0.01
CD47Q08722 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.99□□□□□ -0.01
CD47Q08722 AC105339.3-201ENST00000560043 636 ntBASIC14.99□□□□□ -0.01
CD47Q08722 RN7SL510P-201ENST00000581311 263 ntBASIC14.99□□□□□ -0.01
CD47Q08722 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.99□□□□□ -0.01
CD47Q08722 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.99□□□□□ -0.01
CD47Q08722 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CD47Q08722 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CD47Q08722 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms