Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTRA4P83105 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HTRA4P83105 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HTRA4P83105 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HTRA4P83105 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HTRA4P83105 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTRA4P83105 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.84■□□□□ 0.29
HTRA4P83105 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HTRA4P83105 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.84■□□□□ 0.29
HTRA4P83105 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.84■□□□□ 0.29
HTRA4P83105 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTRA4P83105 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTRA4P83105 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.84■□□□□ 0.29
HTRA4P83105 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HTRA4P83105 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HTRA4P83105 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HTRA4P83105 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HTRA4P83105 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HTRA4P83105 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.83■□□□□ 0.28
HTRA4P83105 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HTRA4P83105 AL133267.1-201ENST00000398220 340 ntBASIC16.83■□□□□ 0.28
HTRA4P83105 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HTRA4P83105 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.83■□□□□ 0.28
HTRA4P83105 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.83■□□□□ 0.28
HTRA4P83105 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.83■□□□□ 0.28
HTRA4P83105 KRT18P25-201ENST00000508931 1278 ntBASIC16.83■□□□□ 0.28
HTRA4P83105 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 AP006547.1-201ENST00000563435 692 ntBASIC16.83■□□□□ 0.28
HTRA4P83105 MIR4741-201ENST00000579822 90 ntBASIC16.83■□□□□ 0.28
HTRA4P83105 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.83■□□□□ 0.28
HTRA4P83105 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.83■□□□□ 0.28
HTRA4P83105 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.83■□□□□ 0.28
HTRA4P83105 UBALD1-205ENST00000590891 2641 ntBASIC16.83■□□□□ 0.28
HTRA4P83105 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.83■□□□□ 0.28
HTRA4P83105 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.83■□□□□ 0.28
HTRA4P83105 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTRA4P83105 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
HTRA4P83105 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 AC138028.6-201ENST00000616106 1482 ntBASIC16.82■□□□□ 0.28
HTRA4P83105 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
HTRA4P83105 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 AC091804.1-201ENST00000486888 567 ntBASIC16.82■□□□□ 0.28
HTRA4P83105 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
HTRA4P83105 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTRA4P83105 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.82■□□□□ 0.28
HTRA4P83105 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA4P83105 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HTRA4P83105 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA4P83105 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA4P83105 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA4P83105 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.81■□□□□ 0.28
HTRA4P83105 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.81■□□□□ 0.28
HTRA4P83105 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTRA4P83105 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms