Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM3BP58499 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM3BP58499 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM3BP58499 AC010460.3-201ENST00000511359 1579 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM3BP58499 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM3BP58499 TSPY12P-201ENST00000421279 868 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM3BP58499 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM3BP58499 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM3BP58499 AC012615.1-201ENST00000565797 1299 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM3BP58499 AP002414.4-201ENST00000589764 1148 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 AC019129.2-201ENST00000609837 1235 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 AL121772.3-201ENST00000610840 674 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM3BP58499 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM3BP58499 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM3BP58499 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 AC069224.1-201ENST00000566372 1715 ntBASIC12.62□□□□□ -0.39
FAM3BP58499 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FAM3BP58499 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM3BP58499 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM3BP58499 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM3BP58499 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 AL135999.2-201ENST00000622438 1686 ntBASIC12.61□□□□□ -0.39
FAM3BP58499 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
FAM3BP58499 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FAM3BP58499 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.61□□□□□ -0.39
FAM3BP58499 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.61□□□□□ -0.39
FAM3BP58499 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.61□□□□□ -0.39
FAM3BP58499 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.61□□□□□ -0.39
FAM3BP58499 AC005332.3-201ENST00000589904 676 ntBASIC12.61□□□□□ -0.39
FAM3BP58499 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.61□□□□□ -0.39
FAM3BP58499 AL390719.2-201ENST00000606993 987 ntBASIC12.61□□□□□ -0.39
FAM3BP58499 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FAM3BP58499 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.61□□□□□ -0.39
FAM3BP58499 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM3BP58499 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms