Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TCAF2P1-201ENST00000291129 2421 ntBASIC14.8□□□□□ -0.04
CLDN20P56880 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 AC142381.1-201ENST00000426099 345 ntBASIC14.8□□□□□ -0.04
CLDN20P56880 RBPMS2P1-201ENST00000437762 623 ntBASIC14.8□□□□□ -0.04
CLDN20P56880 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN20P56880 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.8□□□□□ -0.04
CLDN20P56880 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN20P56880 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 HLA-J-203ENST00000494367 1087 ntBASIC14.8□□□□□ -0.04
CLDN20P56880 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN20P56880 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 AC073389.1-201ENST00000595595 795 ntBASIC14.8□□□□□ -0.04
CLDN20P56880 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN20P56880 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CLDN20P56880 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.79□□□□□ -0.04
CLDN20P56880 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN20P56880 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN20P56880 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 FOXO1B-201ENST00000504678 1527 ntBASIC14.79□□□□□ -0.04
CLDN20P56880 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 AC004449.1-201ENST00000564240 433 ntBASIC14.79□□□□□ -0.04
CLDN20P56880 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.79□□□□□ -0.04
CLDN20P56880 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.79□□□□□ -0.04
CLDN20P56880 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CLDN20P56880 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN20P56880 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
CLDN20P56880 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.79□□□□□ -0.04
CLDN20P56880 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms