Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH13P55290 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH13P55290 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH13P55290 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH13P55290 TPM4P1-201ENST00000436100 807 ntBASIC15.77■□□□□ 0.12
CDH13P55290 RPL13AP23-201ENST00000480739 586 ntBASIC15.77■□□□□ 0.12
CDH13P55290 PRYP6-201ENST00000514804 343 ntBASIC15.77■□□□□ 0.12
CDH13P55290 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH13P55290 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH13P55290 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH13P55290 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH13P55290 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CDH13P55290 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH13P55290 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.77■□□□□ 0.11
CDH13P55290 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH13P55290 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.77■□□□□ 0.11
CDH13P55290 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 AC134407.2-201ENST00000625089 1978 ntBASIC15.76■□□□□ 0.11
CDH13P55290 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 AC063926.3-201ENST00000624734 5658 ntBASIC15.76■□□□□ 0.11
CDH13P55290 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 PMS2P7-201ENST00000506558 1336 ntBASIC15.76■□□□□ 0.11
CDH13P55290 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH13P55290 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.76■□□□□ 0.11
CDH13P55290 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH13P55290 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 MIR4321-201ENST00000592276 80 ntBASIC15.76■□□□□ 0.11
CDH13P55290 AL513190.1-201ENST00000621254 727 ntBASIC15.76■□□□□ 0.11
CDH13P55290 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH13P55290 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH13P55290 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH13P55290 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDH13P55290 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH13P55290 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH13P55290 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms