Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDH11P55287 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CDH11P55287 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.82□□□□□ -0.04
CDH11P55287 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH11P55287 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDH11P55287 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH11P55287 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH11P55287 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDH11P55287 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 MCCD1P2-201ENST00000423228 335 ntBASIC14.81□□□□□ -0.04
CDH11P55287 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH11P55287 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH11P55287 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.81□□□□□ -0.04
CDH11P55287 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH11P55287 AC092865.6-201ENST00000642101 219 ntBASIC14.81□□□□□ -0.04
CDH11P55287 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH11P55287 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 BCAR1-209ENST00000546196 1340 ntBASIC14.81□□□□□ -0.04
CDH11P55287 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH11P55287 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH11P55287 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH11P55287 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH11P55287 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 MIR600HG-201ENST00000449175 5984 ntBASIC14.8□□□□□ -0.04
CDH11P55287 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 AC211486.1-202ENST00000416371 468 ntBASIC14.8□□□□□ -0.04
CDH11P55287 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 SLC25A6P2-201ENST00000497974 877 ntBASIC14.8□□□□□ -0.04
CDH11P55287 AC211476.1-201ENST00000503899 468 ntBASIC14.8□□□□□ -0.04
CDH11P55287 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH11P55287 AC096734.2-201ENST00000562054 433 ntBASIC14.8□□□□□ -0.04
CDH11P55287 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CDH11P55287 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDH11P55287 AL513190.1-201ENST00000621254 727 ntBASIC14.8□□□□□ -0.04
CDH11P55287 AC134684.3-201ENST00000641758 218 ntBASIC14.8□□□□□ -0.04
CDH11P55287 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDH11P55287 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH11P55287 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH11P55287 PPT1-215ENST00000641471 2368 ntBASIC14.8□□□□□ -0.04
CDH11P55287 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CDH11P55287 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH11P55287 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH11P55287 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH11P55287 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH11P55287 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms