Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKN2DP55273 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 SSR4P1-203ENST00000599569 2260 ntBASIC15.89■□□□□ 0.13
CDKN2DP55273 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKN2DP55273 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKN2DP55273 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.89■□□□□ 0.13
CDKN2DP55273 UXT-AS1-201ENST00000590504 1525 ntBASIC15.89■□□□□ 0.13
CDKN2DP55273 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKN2DP55273 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 AL596257.1-201ENST00000641463 2694 ntBASIC15.88■□□□□ 0.13
CDKN2DP55273 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.88■□□□□ 0.13
CDKN2DP55273 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKN2DP55273 HLA-H-201ENST00000383620 1096 ntBASIC15.88■□□□□ 0.13
CDKN2DP55273 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKN2DP55273 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKN2DP55273 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKN2DP55273 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CDKN2DP55273 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKN2DP55273 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 AC084121.4-201ENST00000641598 221 ntBASIC15.88■□□□□ 0.13
CDKN2DP55273 AF228730.8-201ENST00000642140 221 ntBASIC15.88■□□□□ 0.13
CDKN2DP55273 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKN2DP55273 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDKN2DP55273 AC022532.1-201ENST00000624563 1728 ntBASIC15.88■□□□□ 0.13
CDKN2DP55273 ELL2P1-201ENST00000413990 1906 ntBASIC15.88■□□□□ 0.13
CDKN2DP55273 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDKN2DP55273 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 RPS8P6-201ENST00000426177 609 ntBASIC15.87■□□□□ 0.13
CDKN2DP55273 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.87■□□□□ 0.13
CDKN2DP55273 CEND1P1-201ENST00000451006 455 ntBASIC15.87■□□□□ 0.13
CDKN2DP55273 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.87■□□□□ 0.13
CDKN2DP55273 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.87■□□□□ 0.13
CDKN2DP55273 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.87■□□□□ 0.13
CDKN2DP55273 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.87■□□□□ 0.13
CDKN2DP55273 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
CDKN2DP55273 AC105339.1-204ENST00000636249 355 ntBASIC15.87■□□□□ 0.13
CDKN2DP55273 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.87■□□□□ 0.13
CDKN2DP55273 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDKN2DP55273 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 AC092127.1-201ENST00000567093 3455 ntBASIC15.87■□□□□ 0.13
CDKN2DP55273 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 AP3S2-216ENST00000617003 1561 ntBASIC15.87■□□□□ 0.13
CDKN2DP55273 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDKN2DP55273 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms