Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.77□□□□□ -0.52
APOC4P55056 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
APOC4P55056 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
APOC4P55056 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.77□□□□□ -0.52
APOC4P55056 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC4P55056 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
APOC4P55056 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
APOC4P55056 AP001282.1-201ENST00000531301 1499 ntBASIC11.77□□□□□ -0.52
APOC4P55056 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.77□□□□□ -0.52
APOC4P55056 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC4P55056 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.77□□□□□ -0.52
APOC4P55056 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC4P55056 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC4P55056 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
APOC4P55056 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
APOC4P55056 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
APOC4P55056 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 AL035633.1-201ENST00000406139 838 ntBASIC11.77□□□□□ -0.53
APOC4P55056 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
APOC4P55056 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.77□□□□□ -0.53
APOC4P55056 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC4P55056 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC4P55056 SERBP1P5-201ENST00000510079 1181 ntBASIC11.77□□□□□ -0.53
APOC4P55056 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.77□□□□□ -0.53
APOC4P55056 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.77□□□□□ -0.53
APOC4P55056 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 AC010336.2-201ENST00000564226 506 ntBASIC11.77□□□□□ -0.53
APOC4P55056 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.77□□□□□ -0.53
APOC4P55056 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
APOC4P55056 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
APOC4P55056 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.77□□□□□ -0.53
APOC4P55056 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.77□□□□□ -0.53
APOC4P55056 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
APOC4P55056 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.77□□□□□ -0.53
APOC4P55056 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.76□□□□□ -0.53
APOC4P55056 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 AC087499.6-201ENST00000411576 835 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms