Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
CLCN4P51793 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.82■□□□□ 0.28
CLCN4P51793 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLCN4P51793 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLCN4P51793 PDIA3P1-201ENST00000471856 1510 ntBASIC16.81■□□□□ 0.28
CLCN4P51793 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.81■□□□□ 0.28
CLCN4P51793 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLCN4P51793 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLCN4P51793 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 FAM86LP-201ENST00000478302 853 ntBASIC16.81■□□□□ 0.28
CLCN4P51793 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.81■□□□□ 0.28
CLCN4P51793 AL359711.2-201ENST00000563105 872 ntBASIC16.81■□□□□ 0.28
CLCN4P51793 MIR4525-201ENST00000580000 75 ntBASIC16.81■□□□□ 0.28
CLCN4P51793 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLCN4P51793 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLCN4P51793 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.81■□□□□ 0.28
CLCN4P51793 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLCN4P51793 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 CTBP2P5-201ENST00000454986 1264 ntBASIC16.8■□□□□ 0.28
CLCN4P51793 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLCN4P51793 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCN4P51793 TDH-203ENST00000531764 1110 ntBASIC16.8■□□□□ 0.28
CLCN4P51793 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN4P51793 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCN4P51793 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN4P51793 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 BNIP3P1-202ENST00000550043 1585 ntBASIC16.8■□□□□ 0.28
CLCN4P51793 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN4P51793 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN4P51793 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN4P51793 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN4P51793 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN4P51793 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 AC093525.8-201ENST00000624099 1342 ntBASIC16.79■□□□□ 0.28
CLCN4P51793 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLCN4P51793 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN4P51793 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms