Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 AC064836.3-201ENST00000607928 673 ntBASIC14.36□□□□□ -0.11
SRP9P49458 REXO1L3P-201ENST00000622202 1288 ntBASIC14.36□□□□□ -0.11
SRP9P49458 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.36□□□□□ -0.11
SRP9P49458 AP001350.2-201ENST00000625104 1094 ntBASIC14.36□□□□□ -0.11
SRP9P49458 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 AL353732.1-201ENST00000569618 1459 ntBASIC14.36□□□□□ -0.11
SRP9P49458 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.36□□□□□ -0.11
SRP9P49458 AC106881.1-201ENST00000605849 3329 ntBASIC14.36□□□□□ -0.11
SRP9P49458 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.36□□□□□ -0.11
SRP9P49458 AP003680.1-201ENST00000598970 3660 ntBASIC14.36□□□□□ -0.11
SRP9P49458 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SRP9P49458 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SRP9P49458 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
SRP9P49458 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 PMS2P1-201ENST00000431037 1228 ntBASIC14.35□□□□□ -0.11
SRP9P49458 AC007967.2-201ENST00000432613 625 ntBASIC14.35□□□□□ -0.11
SRP9P49458 FAM185BP-201ENST00000443595 716 ntBASIC14.35□□□□□ -0.11
SRP9P49458 HCG4B-203ENST00000450128 991 ntBASIC14.35□□□□□ -0.11
SRP9P49458 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 OR7E47P-204ENST00000575924 449 ntBASIC14.35□□□□□ -0.11
SRP9P49458 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.35□□□□□ -0.11
SRP9P49458 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.35□□□□□ -0.11
SRP9P49458 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 AC007064.4-201ENST00000637740 555 ntBASIC14.35□□□□□ -0.11
SRP9P49458 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SRP9P49458 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 REXO1L8P-201ENST00000604378 1897 ntBASIC14.35□□□□□ -0.11
SRP9P49458 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SRP9P49458 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRP9P49458 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SRP9P49458 SSR4P1-203ENST00000599569 2260 ntBASIC14.34□□□□□ -0.11
SRP9P49458 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.34□□□□□ -0.11
SRP9P49458 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.34□□□□□ -0.11
SRP9P49458 AC136621.1-201ENST00000624017 2304 ntBASIC14.34□□□□□ -0.11
SRP9P49458 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRP9P49458 HCG4-201ENST00000418983 998 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms