Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC1A1P43005 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 AC136621.1-201ENST00000624017 2304 ntBASIC16.85■□□□□ 0.29
SLC1A1P43005 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC1A1P43005 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC1A1P43005 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A1P43005 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SLC1A1P43005 AC087481.3-201ENST00000602886 1894 ntBASIC16.84■□□□□ 0.29
SLC1A1P43005 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC1A1P43005 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A1P43005 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A1P43005 AC142381.1-201ENST00000426099 345 ntBASIC16.84■□□□□ 0.29
SLC1A1P43005 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 RN7SL589P-201ENST00000481268 310 ntBASIC16.84■□□□□ 0.29
SLC1A1P43005 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A1P43005 SLC25A1P1-201ENST00000528351 927 ntBASIC16.84■□□□□ 0.29
SLC1A1P43005 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.84■□□□□ 0.29
SLC1A1P43005 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC1A1P43005 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC1A1P43005 AC091812.2-201ENST00000619081 385 ntBASIC16.84■□□□□ 0.29
SLC1A1P43005 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC1A1P43005 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC1A1P43005 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC1A1P43005 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC1A1P43005 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC1A1P43005 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.83■□□□□ 0.29
SLC1A1P43005 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC1A1P43005 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 FAM220BP-201ENST00000377689 816 ntBASIC16.83■□□□□ 0.28
SLC1A1P43005 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 AC004987.2-201ENST00000395959 1148 ntBASIC16.83■□□□□ 0.28
SLC1A1P43005 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SLC1A1P43005 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.83■□□□□ 0.28
SLC1A1P43005 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.83■□□□□ 0.28
SLC1A1P43005 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC1A1P43005 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC1A1P43005 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC1A1P43005 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC1A1P43005 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC1A1P43005 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC1A1P43005 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC1A1P43005 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC1A1P43005 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC1A1P43005 AC105250.1-201ENST00000509378 2057 ntBASIC16.82■□□□□ 0.28
SLC1A1P43005 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms