Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.16■□□□□ 0.5
PRPHP41219 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.16■□□□□ 0.5
PRPHP41219 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.16■□□□□ 0.5
PRPHP41219 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRPHP41219 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PRPHP41219 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PRPHP41219 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PRPHP41219 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRPHP41219 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.15■□□□□ 0.5
PRPHP41219 HLA-J-203ENST00000494367 1087 ntBASIC18.15■□□□□ 0.5
PRPHP41219 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PRPHP41219 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.15■□□□□ 0.5
PRPHP41219 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PRPHP41219 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.15■□□□□ 0.5
PRPHP41219 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRPHP41219 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRPHP41219 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRPHP41219 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.14■□□□□ 0.49
PRPHP41219 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.14■□□□□ 0.49
PRPHP41219 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.14■□□□□ 0.49
PRPHP41219 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.14■□□□□ 0.49
PRPHP41219 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.14■□□□□ 0.49
PRPHP41219 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.14■□□□□ 0.49
PRPHP41219 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.14■□□□□ 0.49
PRPHP41219 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.14■□□□□ 0.49
PRPHP41219 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 AC079781.4-201ENST00000641908 219 ntBASIC18.14■□□□□ 0.49
PRPHP41219 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.14■□□□□ 0.49
PRPHP41219 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.14■□□□□ 0.49
PRPHP41219 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 AL035456.1-201ENST00000456064 1369 ntBASIC18.14■□□□□ 0.49
PRPHP41219 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.14■□□□□ 0.49
PRPHP41219 KRT8P37-201ENST00000451609 1420 ntBASIC18.14■□□□□ 0.49
PRPHP41219 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRPHP41219 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 REXO1L1P-202ENST00000608646 1974 ntBASIC18.13■□□□□ 0.49
PRPHP41219 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PRPHP41219 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.13■□□□□ 0.49
PRPHP41219 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.13■□□□□ 0.49
PRPHP41219 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.13■□□□□ 0.49
PRPHP41219 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRPHP41219 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 SPDYE7P-202ENST00000420373 878 ntBASIC18.13■□□□□ 0.49
PRPHP41219 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.13■□□□□ 0.49
PRPHP41219 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.13■□□□□ 0.49
PRPHP41219 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.13■□□□□ 0.49
PRPHP41219 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 AL596442.2-201ENST00000610240 980 ntBASIC18.13■□□□□ 0.49
PRPHP41219 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PRPHP41219 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.13■□□□□ 0.49
PRPHP41219 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRPHP41219 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms