Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 LINC02199-201ENST00000506655 2702 ntBASIC14.77□□□□□ -0.04
RFC3P40938 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFC3P40938 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RFC3P40938 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
RFC3P40938 ALOX12P2-203ENST00000570921 1945 ntBASIC14.77□□□□□ -0.04
RFC3P40938 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.77□□□□□ -0.05
RFC3P40938 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.77□□□□□ -0.05
RFC3P40938 AC009407.1-201ENST00000568958 598 ntBASIC14.77□□□□□ -0.05
RFC3P40938 AL844908.2-201ENST00000609461 460 ntBASIC14.77□□□□□ -0.05
RFC3P40938 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
RFC3P40938 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.77□□□□□ -0.05
RFC3P40938 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.77□□□□□ -0.05
RFC3P40938 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RFC3P40938 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.77□□□□□ -0.05
RFC3P40938 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RFC3P40938 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RFC3P40938 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFC3P40938 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.77□□□□□ -0.05
RFC3P40938 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RFC3P40938 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RFC3P40938 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.76□□□□□ -0.05
RFC3P40938 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RFC3P40938 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.76□□□□□ -0.05
RFC3P40938 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.76□□□□□ -0.05
RFC3P40938 AC023824.1-201ENST00000562945 2975 ntBASIC14.76□□□□□ -0.05
RFC3P40938 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.76□□□□□ -0.05
RFC3P40938 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
RFC3P40938 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.76□□□□□ -0.05
RFC3P40938 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFC3P40938 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.76□□□□□ -0.05
RFC3P40938 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RFC3P40938 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.75□□□□□ -0.05
RFC3P40938 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
RFC3P40938 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 LINC01144-201ENST00000626198 1710 ntBASIC14.75□□□□□ -0.05
RFC3P40938 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 AC087499.5-201ENST00000452760 1342 ntBASIC14.75□□□□□ -0.05
RFC3P40938 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.75□□□□□ -0.05
RFC3P40938 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.75□□□□□ -0.05
RFC3P40938 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFC3P40938 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms