Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CD40LGP29965 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.33□□□□□ -0.12
CD40LGP29965 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CD40LGP29965 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 AC140479.7-201ENST00000636301 2332 ntBASIC14.33□□□□□ -0.12
CD40LGP29965 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 GPAA1P2-202ENST00000606848 1787 ntBASIC14.32□□□□□ -0.12
CD40LGP29965 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.32□□□□□ -0.12
CD40LGP29965 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 KRT18P48-201ENST00000434763 852 ntBASIC14.32□□□□□ -0.12
CD40LGP29965 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 AC112907.2-201ENST00000448639 330 ntBASIC14.32□□□□□ -0.12
CD40LGP29965 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.32□□□□□ -0.12
CD40LGP29965 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.32□□□□□ -0.12
CD40LGP29965 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.32□□□□□ -0.12
CD40LGP29965 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.32□□□□□ -0.12
CD40LGP29965 AC087388.1-201ENST00000571370 1112 ntBASIC14.32□□□□□ -0.12
CD40LGP29965 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.32□□□□□ -0.12
CD40LGP29965 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CD40LGP29965 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD40LGP29965 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.32□□□□□ -0.12
CD40LGP29965 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD40LGP29965 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 AL353593.2-201ENST00000602529 1483 ntBASIC14.31□□□□□ -0.12
CD40LGP29965 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CD40LGP29965 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CD40LGP29965 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD40LGP29965 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms