Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC006486.2-201ENST00000624246 2199 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 AC023157.3-201ENST00000619086 2088 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PTPN6P29350 KRT18P34-201ENST00000488218 1270 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 AC112191.1-201ENST00000523689 701 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.28■□□□□ 0.04
PTPN6P29350 MIR4469-201ENST00000583919 79 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.28■□□□□ 0.04
PTPN6P29350 MIR4321-201ENST00000592276 80 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.28■□□□□ 0.04
PTPN6P29350 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
PTPN6P29350 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 AC092902.6-201ENST00000641783 218 ntBASIC15.28■□□□□ 0.04
PTPN6P29350 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PTPN6P29350 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN6P29350 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PTPN6P29350 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN6P29350 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
PTPN6P29350 ELL2P1-201ENST00000413990 1906 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PTPN6P29350 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
PTPN6P29350 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.27■□□□□ 0.04
PTPN6P29350 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 MST1L-201ENST00000442552 2185 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
PTPN6P29350 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 AC211486.1-202ENST00000416371 468 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.27■□□□□ 0.04
PTPN6P29350 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.27■□□□□ 0.04
PTPN6P29350 ACTG1P14-201ENST00000446382 1122 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 AC004967.1-201ENST00000453589 447 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 AC211476.1-201ENST00000503899 468 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN6P29350 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.27■□□□□ 0.04
PTPN6P29350 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN6P29350 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN6P29350 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN6P29350 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN6P29350 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN6P29350 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN6P29350 AL691403.2-201ENST00000618460 490 ntBASIC15.27■□□□□ 0.04
PTPN6P29350 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN6P29350 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.27■□□□□ 0.03
PTPN6P29350 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PTPN6P29350 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PTPN6P29350 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN6P29350 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.27■□□□□ 0.03
PTPN6P29350 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
PTPN6P29350 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PTPN6P29350 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN6P29350 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN6P29350 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PTPN6P29350 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN6P29350 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN6P29350 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN6P29350 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PTPN6P29350 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms