Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.38■□□□□ 0.21
NFKB1P19838 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NFKB1P19838 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NFKB1P19838 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 AL136982.4-201ENST00000437689 1740 ntBASIC16.37■□□□□ 0.21
NFKB1P19838 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NFKB1P19838 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NFKB1P19838 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NFKB1P19838 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.37■□□□□ 0.21
NFKB1P19838 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NFKB1P19838 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.37■□□□□ 0.21
NFKB1P19838 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.37■□□□□ 0.21
NFKB1P19838 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.37■□□□□ 0.21
NFKB1P19838 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NFKB1P19838 AC243562.2-201ENST00000561247 970 ntBASIC16.37■□□□□ 0.21
NFKB1P19838 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.37■□□□□ 0.21
NFKB1P19838 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.37■□□□□ 0.21
NFKB1P19838 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.37■□□□□ 0.21
NFKB1P19838 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NFKB1P19838 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.37■□□□□ 0.21
NFKB1P19838 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NFKB1P19838 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NFKB1P19838 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 BNIP3P1-202ENST00000550043 1585 ntBASIC16.36■□□□□ 0.21
NFKB1P19838 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NFKB1P19838 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NFKB1P19838 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.36■□□□□ 0.21
NFKB1P19838 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NFKB1P19838 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.36■□□□□ 0.21
NFKB1P19838 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.36■□□□□ 0.21
NFKB1P19838 RPS8P6-201ENST00000426177 609 ntBASIC16.36■□□□□ 0.21
NFKB1P19838 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.36■□□□□ 0.21
NFKB1P19838 ALG1L8P-201ENST00000533887 760 ntBASIC16.36■□□□□ 0.21
NFKB1P19838 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.36■□□□□ 0.21
NFKB1P19838 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NFKB1P19838 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NFKB1P19838 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
NFKB1P19838 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms