Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LCP1P13796 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCP1P13796 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCP1P13796 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCP1P13796 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.95■□□□□ 0.3
LCP1P13796 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
LCP1P13796 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCP1P13796 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.95■□□□□ 0.3
LCP1P13796 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.95■□□□□ 0.3
LCP1P13796 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LCP1P13796 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 AL603832.2-201ENST00000566195 2125 ntBASIC16.94■□□□□ 0.3
LCP1P13796 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 CDC14C-201ENST00000428251 1719 ntBASIC16.94■□□□□ 0.3
LCP1P13796 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.94■□□□□ 0.3
LCP1P13796 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LCP1P13796 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.94■□□□□ 0.3
LCP1P13796 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 IGHV3-42-201ENST00000520410 361 ntBASIC16.94■□□□□ 0.3
LCP1P13796 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.94■□□□□ 0.3
LCP1P13796 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LCP1P13796 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.94■□□□□ 0.3
LCP1P13796 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 LINC02447-202ENST00000501888 2146 ntBASIC16.94■□□□□ 0.3
LCP1P13796 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LCP1P13796 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCP1P13796 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LCP1P13796 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LCP1P13796 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.93■□□□□ 0.3
LCP1P13796 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
LCP1P13796 CYMP-203ENST00000474680 1263 ntBASIC16.93■□□□□ 0.3
LCP1P13796 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
LCP1P13796 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.93■□□□□ 0.3
LCP1P13796 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.93■□□□□ 0.3
LCP1P13796 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.93■□□□□ 0.3
LCP1P13796 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.93■□□□□ 0.3
LCP1P13796 SPDYE12P-201ENST00000618416 771 ntBASIC16.93■□□□□ 0.3
LCP1P13796 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 CETN4P-206ENST00000642099 2168 ntBASIC16.93■□□□□ 0.3
LCP1P13796 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.93■□□□□ 0.3
LCP1P13796 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LCP1P13796 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LCP1P13796 BNIP3P1-202ENST00000550043 1585 ntBASIC16.93■□□□□ 0.3
LCP1P13796 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCP1P13796 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LCP1P13796 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
LCP1P13796 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
LCP1P13796 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCP1P13796 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms