Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
ITGA4P13612 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
ITGA4P13612 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.66■□□□□ 0.42
ITGA4P13612 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.66■□□□□ 0.42
ITGA4P13612 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.66■□□□□ 0.42
ITGA4P13612 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.66■□□□□ 0.42
ITGA4P13612 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ITGA4P13612 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ITGA4P13612 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ITGA4P13612 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 CROCCP1-201ENST00000426910 5675 ntBASIC17.65■□□□□ 0.42
ITGA4P13612 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.65■□□□□ 0.42
ITGA4P13612 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ITGA4P13612 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.65■□□□□ 0.42
ITGA4P13612 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.65■□□□□ 0.42
ITGA4P13612 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ITGA4P13612 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 AL844908.2-201ENST00000609461 460 ntBASIC17.65■□□□□ 0.42
ITGA4P13612 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ITGA4P13612 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ITGA4P13612 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ITGA4P13612 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ITGA4P13612 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.64■□□□□ 0.42
ITGA4P13612 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.64■□□□□ 0.42
ITGA4P13612 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.64■□□□□ 0.41
ITGA4P13612 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.64■□□□□ 0.41
ITGA4P13612 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ITGA4P13612 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
ITGA4P13612 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 AC009407.1-201ENST00000568958 598 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
ITGA4P13612 AF228730.6-201ENST00000641497 218 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 AC084121.3-201ENST00000641716 218 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 AC105233.6-201ENST00000642093 218 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 MTHFR-217ENST00000641820 1569 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.64■□□□□ 0.41
ITGA4P13612 U82695.1-201ENST00000635752 1889 ntBASIC17.64■□□□□ 0.41
ITGA4P13612 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.64■□□□□ 0.41
ITGA4P13612 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ITGA4P13612 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ITGA4P13612 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.64■□□□□ 0.41
ITGA4P13612 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms