Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 TREML5P-201ENST00000421694 576 ntBASIC17.63■□□□□ 0.41
CLTAP09496 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.63■□□□□ 0.41
CLTAP09496 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.63■□□□□ 0.41
CLTAP09496 AL390955.2-201ENST00000603032 514 ntBASIC17.63■□□□□ 0.41
CLTAP09496 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.63■□□□□ 0.41
CLTAP09496 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 FO538757.1-201ENST00000623083 1397 ntBASIC17.63■□□□□ 0.41
CLTAP09496 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CLTAP09496 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLTAP09496 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLTAP09496 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.63■□□□□ 0.41
CLTAP09496 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLTAP09496 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLTAP09496 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.62■□□□□ 0.41
CLTAP09496 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.62■□□□□ 0.41
CLTAP09496 HMGN1P19-201ENST00000436976 333 ntBASIC17.62■□□□□ 0.41
CLTAP09496 MTND6P24-201ENST00000440466 518 ntBASIC17.62■□□□□ 0.41
CLTAP09496 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.62■□□□□ 0.41
CLTAP09496 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.62■□□□□ 0.41
CLTAP09496 AC097493.3-201ENST00000509725 367 ntBASIC17.62■□□□□ 0.41
CLTAP09496 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.62■□□□□ 0.41
CLTAP09496 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.62■□□□□ 0.41
CLTAP09496 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.62■□□□□ 0.41
CLTAP09496 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.62■□□□□ 0.41
CLTAP09496 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.62■□□□□ 0.41
CLTAP09496 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.62■□□□□ 0.41
CLTAP09496 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLTAP09496 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.62■□□□□ 0.41
CLTAP09496 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLTAP09496 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 AC006449.6-201ENST00000612330 2296 ntBASIC17.61■□□□□ 0.41
CLTAP09496 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.61■□□□□ 0.41
CLTAP09496 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CLTAP09496 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLTAP09496 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.61■□□□□ 0.41
CLTAP09496 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.61■□□□□ 0.41
CLTAP09496 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.61■□□□□ 0.41
CLTAP09496 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.61■□□□□ 0.41
CLTAP09496 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 AC245100.5-201ENST00000452108 331 ntBASIC17.61■□□□□ 0.41
CLTAP09496 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 HLA-V-204ENST00000476601 1289 ntBASIC17.61■□□□□ 0.41
CLTAP09496 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.61■□□□□ 0.41
CLTAP09496 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.61■□□□□ 0.41
CLTAP09496 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLTAP09496 AL133215.2-201ENST00000609242 977 ntBASIC17.61■□□□□ 0.41
CLTAP09496 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 AC073592.8-201ENST00000624126 511 ntBASIC17.61■□□□□ 0.41
CLTAP09496 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLTAP09496 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms