Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND1P03886 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.25■□□□□ 0.03
MT-ND1P03886 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MT-ND1P03886 AF238378.1-201ENST00000526806 358 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND1P03886 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND1P03886 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND1P03886 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND1P03886 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MT-ND1P03886 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MT-ND1P03886 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND1P03886 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND1P03886 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND1P03886 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 TCAF2P1-201ENST00000291129 2421 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND1P03886 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
MT-ND1P03886 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 AC087481.3-201ENST00000602886 1894 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.25■□□□□ 0.03
MT-ND1P03886 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND1P03886 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 ELK2BP-201ENST00000415014 1224 ntBASIC15.24■□□□□ 0.03
MT-ND1P03886 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.24■□□□□ 0.03
MT-ND1P03886 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.24■□□□□ 0.03
MT-ND1P03886 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND1P03886 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND1P03886 AC107918.4-202ENST00000641623 219 ntBASIC15.24■□□□□ 0.03
MT-ND1P03886 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MT-ND1P03886 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.24■□□□□ 0.03
MT-ND1P03886 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.24■□□□□ 0.03
MT-ND1P03886 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 AC026748.1-201ENST00000624349 3251 ntBASIC15.23■□□□□ 0.03
MT-ND1P03886 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MT-ND1P03886 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 AC092127.1-201ENST00000567093 3455 ntBASIC15.23■□□□□ 0.03
MT-ND1P03886 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-ND1P03886 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.23■□□□□ 0.03
MT-ND1P03886 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MT-ND1P03886 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.23■□□□□ 0.03
MT-ND1P03886 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.23■□□□□ 0.03
MT-ND1P03886 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms