Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 IGLL3P-201ENST00000412472 434 ntBASIC14.32□□□□□ -0.12
APOC1P02654 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.32□□□□□ -0.12
APOC1P02654 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.32□□□□□ -0.12
APOC1P02654 AL009183.1-201ENST00000603760 355 ntBASIC14.32□□□□□ -0.12
APOC1P02654 AL365330.1-201ENST00000607459 531 ntBASIC14.32□□□□□ -0.12
APOC1P02654 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
APOC1P02654 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC1P02654 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC1P02654 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOC1P02654 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 MRPL3P1-201ENST00000400109 1033 ntBASIC14.31□□□□□ -0.12
APOC1P02654 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.31□□□□□ -0.12
APOC1P02654 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC1P02654 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 RNA5SP419-201ENST00000515908 135 ntBASIC14.31□□□□□ -0.12
APOC1P02654 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC1P02654 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC1P02654 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.31□□□□□ -0.12
APOC1P02654 SLC25A6P4-201ENST00000586535 553 ntBASIC14.31□□□□□ -0.12
APOC1P02654 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC1P02654 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC1P02654 AL161645.1-201ENST00000622716 1255 ntBASIC14.31□□□□□ -0.12
APOC1P02654 AC010507.1-201ENST00000633895 436 ntBASIC14.31□□□□□ -0.12
APOC1P02654 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
APOC1P02654 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
APOC1P02654 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.31□□□□□ -0.12
APOC1P02654 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
APOC1P02654 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOC1P02654 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOC1P02654 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOC1P02654 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.3□□□□□ -0.12
APOC1P02654 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOC1P02654 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms