Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 KRT18P34-201ENST00000488218 1270 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 KRT126P-201ENST00000549467 1181 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AC096734.2-201ENST00000562054 433 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AC104692.2-201ENST00000603054 253 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AC023141.13-201ENST00000604991 943 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AC010507.1-201ENST00000633895 436 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 LINC00554-201ENST00000564841 3011 ntBASIC14.53□□□□□ -0.08
HLA-DQA2P01906 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DQA2P01906 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DQA2P01906 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 HCG4B-203ENST00000450128 991 ntBASIC14.52□□□□□ -0.09
HLA-DQA2P01906 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 AP005117.1-202ENST00000581724 1908 ntBASIC14.52□□□□□ -0.09
HLA-DQA2P01906 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DQA2P01906 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 TPM4P1-201ENST00000436100 807 ntBASIC14.51□□□□□ -0.09
HLA-DQA2P01906 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 Z83851.2-201ENST00000609564 659 ntBASIC14.51□□□□□ -0.09
HLA-DQA2P01906 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA2P01906 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms