Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.79□□□□□ -0.36
IFNA1P01562 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 TERC-201ENST00000602385 541 ntBASIC12.79□□□□□ -0.36
IFNA1P01562 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 AL138831.2-201ENST00000606564 490 ntBASIC12.79□□□□□ -0.36
IFNA1P01562 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 LINC00552-201ENST00000625151 2579 ntBASIC12.79□□□□□ -0.36
IFNA1P01562 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.79□□□□□ -0.36
IFNA1P01562 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IFNA1P01562 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.79□□□□□ -0.36
IFNA1P01562 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.79□□□□□ -0.36
IFNA1P01562 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.79□□□□□ -0.36
IFNA1P01562 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 LINC01238-205ENST00000567549 1107 ntBASIC12.78□□□□□ -0.36
IFNA1P01562 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.78□□□□□ -0.36
IFNA1P01562 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
IFNA1P01562 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms