Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.14■□□□□ 0.33
TIMP1P01033 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP1P01033 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TIMP1P01033 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMP1P01033 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP1P01033 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP1P01033 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP1P01033 AC097359.3-201ENST00000603982 1210 ntBASIC17.14■□□□□ 0.33
TIMP1P01033 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP1P01033 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP1P01033 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TIMP1P01033 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP1P01033 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMP1P01033 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TIMP1P01033 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMP1P01033 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP1P01033 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMP1P01033 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TIMP1P01033 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.13■□□□□ 0.33
TIMP1P01033 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 AC138627.1-207ENST00000641560 1006 ntBASIC17.13■□□□□ 0.33
TIMP1P01033 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TIMP1P01033 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP1P01033 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 KRT8P35-201ENST00000483942 1338 ntBASIC17.13■□□□□ 0.33
TIMP1P01033 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.13■□□□□ 0.33
TIMP1P01033 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP1P01033 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMP1P01033 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP1P01033 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TIMP1P01033 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
TIMP1P01033 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 AC018735.1-201ENST00000437208 1502 ntBASIC17.12■□□□□ 0.33
TIMP1P01033 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TIMP1P01033 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.12■□□□□ 0.33
TIMP1P01033 AL590640.2-201ENST00000457038 527 ntBASIC17.12■□□□□ 0.33
TIMP1P01033 CHMP4BP1-201ENST00000556017 588 ntBASIC17.12■□□□□ 0.33
TIMP1P01033 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMP1P01033 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMP1P01033 MIR4706-201ENST00000582134 82 ntBASIC17.12■□□□□ 0.33
TIMP1P01033 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.12■□□□□ 0.33
TIMP1P01033 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMP1P01033 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
TIMP1P01033 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.12■□□□□ 0.33
TIMP1P01033 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.12■□□□□ 0.33
TIMP1P01033 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP1P01033 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.12■□□□□ 0.33
TIMP1P01033 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TIMP1P01033 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TIMP1P01033 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TIMP1P01033 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TIMP1P01033 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TIMP1P01033 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMP1P01033 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMP1P01033 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TIMP1P01033 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP1P01033 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TIMP1P01033 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMP1P01033 POM121L10P-201ENST00000436994 1285 ntBASIC17.11■□□□□ 0.33
TIMP1P01033 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TIMP1P01033 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms