Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDRT1O95170 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CDRT1O95170 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CDRT1O95170 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.43□□□□□ -0.1
CDRT1O95170 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.43□□□□□ -0.1
CDRT1O95170 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.43□□□□□ -0.1
CDRT1O95170 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.43□□□□□ -0.1
CDRT1O95170 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 AL591684.3-201ENST00000605187 298 ntBASIC14.43□□□□□ -0.1
CDRT1O95170 AC010331.1-201ENST00000611423 582 ntBASIC14.43□□□□□ -0.1
CDRT1O95170 AC092119.3-201ENST00000612618 583 ntBASIC14.43□□□□□ -0.1
CDRT1O95170 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CDRT1O95170 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 AP000550.4-202ENST00000639755 178 ntBASIC14.43□□□□□ -0.1
CDRT1O95170 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.43□□□□□ -0.1
CDRT1O95170 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDRT1O95170 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDRT1O95170 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDRT1O95170 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.43□□□□□ -0.1
CDRT1O95170 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 AC091951.1-201ENST00000512854 2465 ntBASIC14.42□□□□□ -0.1
CDRT1O95170 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.42□□□□□ -0.1
CDRT1O95170 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.42□□□□□ -0.1
CDRT1O95170 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.42□□□□□ -0.1
CDRT1O95170 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.42□□□□□ -0.1
CDRT1O95170 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.42□□□□□ -0.1
CDRT1O95170 AC138894.3-201ENST00000603787 634 ntBASIC14.42□□□□□ -0.1
CDRT1O95170 AC064862.7-201ENST00000604520 867 ntBASIC14.42□□□□□ -0.1
CDRT1O95170 AC069148.1-201ENST00000608741 768 ntBASIC14.42□□□□□ -0.1
CDRT1O95170 NPAP1P7-201ENST00000613027 823 ntBASIC14.42□□□□□ -0.1
CDRT1O95170 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CDRT1O95170 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDRT1O95170 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDRT1O95170 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.42□□□□□ -0.1
CDRT1O95170 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDRT1O95170 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDRT1O95170 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.41□□□□□ -0.1
CDRT1O95170 AP005117.1-201ENST00000584346 1413 ntBASIC14.41□□□□□ -0.1
CDRT1O95170 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDRT1O95170 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.41□□□□□ -0.1
CDRT1O95170 AC007191.1-201ENST00000623179 2995 ntBASIC14.41□□□□□ -0.1
CDRT1O95170 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDRT1O95170 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.41□□□□□ -0.1
CDRT1O95170 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.41□□□□□ -0.1
CDRT1O95170 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDRT1O95170 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms