Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.05□□□□□ -0.16
UPK1BO75841 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 MPDU1-223ENST00000582151 728 ntBASIC14.05□□□□□ -0.16
UPK1BO75841 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1BO75841 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 AC125634.1-201ENST00000438758 1403 ntBASIC14.05□□□□□ -0.16
UPK1BO75841 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1BO75841 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UPK1BO75841 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 AC087386.2-201ENST00000623212 4637 ntBASIC14.04□□□□□ -0.16
UPK1BO75841 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
UPK1BO75841 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 AC023024.2-201ENST00000623561 1993 ntBASIC14.04□□□□□ -0.16
UPK1BO75841 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.04□□□□□ -0.16
UPK1BO75841 INTS4P1-203ENST00000641008 3683 ntBASIC14.04□□□□□ -0.16
UPK1BO75841 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
UPK1BO75841 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 HBZP1-201ENST00000354915 429 ntBASIC14.04□□□□□ -0.16
UPK1BO75841 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.04□□□□□ -0.16
UPK1BO75841 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
UPK1BO75841 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.04□□□□□ -0.16
UPK1BO75841 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1BO75841 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1BO75841 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.04□□□□□ -0.16
UPK1BO75841 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK1BO75841 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK1BO75841 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
UPK1BO75841 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 HAUS4P1-201ENST00000406739 1145 ntBASIC14.03□□□□□ -0.16
UPK1BO75841 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 FAM8A3P-201ENST00000427218 844 ntBASIC14.03□□□□□ -0.16
UPK1BO75841 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1BO75841 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.03□□□□□ -0.16
UPK1BO75841 AL162430.1-201ENST00000480705 870 ntBASIC14.03□□□□□ -0.16
UPK1BO75841 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.03□□□□□ -0.16
UPK1BO75841 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.03□□□□□ -0.16
UPK1BO75841 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1BO75841 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UPK1BO75841 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms