Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.12■□□□□ 0.01
HCN1O60741 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.12■□□□□ 0.01
HCN1O60741 CYMP-203ENST00000474680 1263 ntBASIC15.12■□□□□ 0.01
HCN1O60741 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.12■□□□□ 0.01
HCN1O60741 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.12■□□□□ 0.01
HCN1O60741 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.12■□□□□ 0.01
HCN1O60741 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.12■□□□□ 0.01
HCN1O60741 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.12■□□□□ 0.01
HCN1O60741 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.12■□□□□ 0.01
HCN1O60741 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 AC009093.7-201ENST00000623853 1223 ntBASIC15.12■□□□□ 0.01
HCN1O60741 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.12■□□□□ 0.01
HCN1O60741 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HCN1O60741 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 GGT4P-201ENST00000623672 1708 ntBASIC15.12■□□□□ 0.01
HCN1O60741 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 MIR600HG-201ENST00000449175 5984 ntBASIC15.11■□□□□ 0.01
HCN1O60741 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HCN1O60741 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 AL596087.1-201ENST00000400979 1969 ntBASIC15.11■□□□□ 0.01
HCN1O60741 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 AL139400.1-201ENST00000366220 510 ntBASIC15.11■□□□□ 0.01
HCN1O60741 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.11■□□□□ 0.01
HCN1O60741 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.11■□□□□ 0.01
HCN1O60741 IGHV3-62-201ENST00000520057 340 ntBASIC15.11■□□□□ 0.01
HCN1O60741 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.11■□□□□ 0.01
HCN1O60741 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.11■□□□□ 0.01
HCN1O60741 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.11■□□□□ 0.01
HCN1O60741 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 CYP2A7P1-201ENST00000595391 815 ntBASIC15.11■□□□□ 0.01
HCN1O60741 AC021097.1-201ENST00000607902 574 ntBASIC15.11■□□□□ 0.01
HCN1O60741 LINC00628-201ENST00000628516 1289 ntBASIC15.11■□□□□ 0.01
HCN1O60741 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HCN1O60741 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HCN1O60741 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
HCN1O60741 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HCN1O60741 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HCN1O60741 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCN1O60741 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms