Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.33□□□□□ -0.12
GMDSO60547 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GMDSO60547 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GMDSO60547 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GMDSO60547 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 AC006449.6-201ENST00000612330 2296 ntBASIC14.32□□□□□ -0.12
GMDSO60547 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 AC104109.2-201ENST00000602919 1418 ntBASIC14.32□□□□□ -0.12
GMDSO60547 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 AC012569.1-201ENST00000591191 1524 ntBASIC14.32□□□□□ -0.12
GMDSO60547 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.32□□□□□ -0.12
GMDSO60547 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 HCG4B-203ENST00000450128 991 ntBASIC14.32□□□□□ -0.12
GMDSO60547 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.32□□□□□ -0.12
GMDSO60547 AC034105.1-201ENST00000563488 319 ntBASIC14.32□□□□□ -0.12
GMDSO60547 MIR4515-201ENST00000584082 81 ntBASIC14.32□□□□□ -0.12
GMDSO60547 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.32□□□□□ -0.12
GMDSO60547 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 AL645728.2-201ENST00000641974 660 ntBASIC14.32□□□□□ -0.12
GMDSO60547 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.32□□□□□ -0.12
GMDSO60547 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.32□□□□□ -0.12
GMDSO60547 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
GMDSO60547 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 GPAA1P2-202ENST00000606848 1787 ntBASIC14.32□□□□□ -0.12
GMDSO60547 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GMDSO60547 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.31□□□□□ -0.12
GMDSO60547 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.31□□□□□ -0.12
GMDSO60547 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.31□□□□□ -0.12
GMDSO60547 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GMDSO60547 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.31□□□□□ -0.12
GMDSO60547 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GMDSO60547 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GMDSO60547 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GMDSO60547 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
GMDSO60547 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GMDSO60547 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.31□□□□□ -0.12
GMDSO60547 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GMDSO60547 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.31□□□□□ -0.12
GMDSO60547 AL513480.1-201ENST00000451731 511 ntBASIC14.31□□□□□ -0.12
GMDSO60547 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.31□□□□□ -0.12
GMDSO60547 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GMDSO60547 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms