Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ACTN4O43707 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.04■□□□□ 0.48
ACTN4O43707 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ACTN4O43707 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.04■□□□□ 0.48
ACTN4O43707 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 FAM220BP-201ENST00000377689 816 ntBASIC18.04■□□□□ 0.48
ACTN4O43707 MIR574-201ENST00000385209 96 ntBASIC18.04■□□□□ 0.48
ACTN4O43707 FAM86C2P-203ENST00000528684 1004 ntBASIC18.04■□□□□ 0.48
ACTN4O43707 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.04■□□□□ 0.48
ACTN4O43707 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.04■□□□□ 0.48
ACTN4O43707 AC024267.1-201ENST00000582320 895 ntBASIC18.04■□□□□ 0.48
ACTN4O43707 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.04■□□□□ 0.48
ACTN4O43707 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.04■□□□□ 0.48
ACTN4O43707 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.04■□□□□ 0.48
ACTN4O43707 AC011270.2-201ENST00000624293 2550 ntBASIC18.04■□□□□ 0.48
ACTN4O43707 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.04■□□□□ 0.48
ACTN4O43707 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 MIR940-201ENST00000401276 94 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 RN7SL589P-201ENST00000481268 310 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.03■□□□□ 0.48
ACTN4O43707 AC079140.1-201ENST00000508039 487 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.03■□□□□ 0.48
ACTN4O43707 AC040169.1-201ENST00000565382 521 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.03■□□□□ 0.48
ACTN4O43707 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
ACTN4O43707 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.03■□□□□ 0.48
ACTN4O43707 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 AC105250.1-201ENST00000509378 2057 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ACTN4O43707 AL136982.4-201ENST00000437689 1740 ntBASIC18.03■□□□□ 0.48
ACTN4O43707 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.03■□□□□ 0.48
ACTN4O43707 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ACTN4O43707 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.02■□□□□ 0.48
ACTN4O43707 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
ACTN4O43707 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ACTN4O43707 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ACTN4O43707 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 YBX2P1-201ENST00000394192 760 ntBASIC18.02■□□□□ 0.48
ACTN4O43707 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ACTN4O43707 RPS8P6-201ENST00000426177 609 ntBASIC18.02■□□□□ 0.48
ACTN4O43707 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.02■□□□□ 0.48
ACTN4O43707 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.02■□□□□ 0.48
ACTN4O43707 AC243562.2-201ENST00000561247 970 ntBASIC18.02■□□□□ 0.48
ACTN4O43707 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ACTN4O43707 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.02■□□□□ 0.48
ACTN4O43707 AL671883.3-201ENST00000603274 991 ntBASIC18.02■□□□□ 0.48
ACTN4O43707 AC026120.1-201ENST00000611536 926 ntBASIC18.02■□□□□ 0.48
ACTN4O43707 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ACTN4O43707 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACTN4O43707 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ACTN4O43707 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
ACTN4O43707 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.02■□□□□ 0.47
ACTN4O43707 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.02■□□□□ 0.47
ACTN4O43707 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ACTN4O43707 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ACTN4O43707 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.02■□□□□ 0.47
ACTN4O43707 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ACTN4O43707 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms