Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.37■□□□□ 0.21
RIPK2O43353 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.37■□□□□ 0.21
RIPK2O43353 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.37■□□□□ 0.21
RIPK2O43353 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.37■□□□□ 0.21
RIPK2O43353 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.37■□□□□ 0.21
RIPK2O43353 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.37■□□□□ 0.21
RIPK2O43353 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.37■□□□□ 0.21
RIPK2O43353 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.37■□□□□ 0.21
RIPK2O43353 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RIPK2O43353 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.37■□□□□ 0.21
RIPK2O43353 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RIPK2O43353 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 AC013726.1-201ENST00000563747 2285 ntBASIC16.36■□□□□ 0.21
RIPK2O43353 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RIPK2O43353 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 AC005089.1-201ENST00000619486 2241 ntBASIC16.36■□□□□ 0.21
RIPK2O43353 MRPL20P1-201ENST00000400819 433 ntBASIC16.36■□□□□ 0.21
RIPK2O43353 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 MIR4321-201ENST00000592276 80 ntBASIC16.36■□□□□ 0.21
RIPK2O43353 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RIPK2O43353 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 KRT8P44-201ENST00000441609 1350 ntBASIC16.36■□□□□ 0.21
RIPK2O43353 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.36■□□□□ 0.21
RIPK2O43353 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RIPK2O43353 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 AKR1C7P-201ENST00000305623 895 ntBASIC16.35■□□□□ 0.21
RIPK2O43353 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.35■□□□□ 0.21
RIPK2O43353 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 AL121772.3-201ENST00000610840 674 ntBASIC16.35■□□□□ 0.21
RIPK2O43353 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RIPK2O43353 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RIPK2O43353 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.35■□□□□ 0.21
RIPK2O43353 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RIPK2O43353 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RIPK2O43353 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RIPK2O43353 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms