Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.42■□□□□ 0.06
PCDH17O14917 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH17O14917 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PCDH17O14917 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH17O14917 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDH17O14917 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 AL512652.2-201ENST00000625156 1716 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PCDH17O14917 AC107890.1-201ENST00000422478 521 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDH17O14917 RARRES2P9-201ENST00000565168 469 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDH17O14917 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 AL158211.3-201ENST00000607385 239 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 SPTSSB-204ENST00000617024 1292 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.41■□□□□ 0.06
PCDH17O14917 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDH17O14917 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PCDH17O14917 AC073439.1-201ENST00000624121 1774 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH17O14917 TSPY26P-202ENST00000565928 3884 ntBASIC15.41■□□□□ 0.06
PCDH17O14917 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH17O14917 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDH17O14917 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 AL035456.1-201ENST00000456064 1369 ntBASIC15.4■□□□□ 0.06
PCDH17O14917 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH17O14917 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.4■□□□□ 0.06
PCDH17O14917 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH17O14917 AC125807.1-201ENST00000483097 614 ntBASIC15.4■□□□□ 0.06
PCDH17O14917 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH17O14917 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH17O14917 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH17O14917 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH17O14917 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH17O14917 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH17O14917 AC018529.1-201ENST00000613063 361 ntBASIC15.4■□□□□ 0.06
PCDH17O14917 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PCDH17O14917 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH17O14917 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH17O14917 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH17O14917 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms