Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.86■□□□□ 0.29
SOX1O00570 AC106794.1-201ENST00000506935 792 ntBASIC16.86■□□□□ 0.29
SOX1O00570 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.86■□□□□ 0.29
SOX1O00570 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.86■□□□□ 0.29
SOX1O00570 AC020922.3-201ENST00000595064 547 ntBASIC16.86■□□□□ 0.29
SOX1O00570 AC012044.1-201ENST00000603431 297 ntBASIC16.86■□□□□ 0.29
SOX1O00570 MIR6842-201ENST00000612539 65 ntBASIC16.86■□□□□ 0.29
SOX1O00570 AC244157.2-201ENST00000616239 1006 ntBASIC16.86■□□□□ 0.29
SOX1O00570 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SOX1O00570 DRD5P1-201ENST00000456605 1438 ntBASIC16.86■□□□□ 0.29
SOX1O00570 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX1O00570 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SOX1O00570 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SOX1O00570 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.85■□□□□ 0.29
SOX1O00570 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 AC011742.3-201ENST00000439053 820 ntBASIC16.85■□□□□ 0.29
SOX1O00570 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.85■□□□□ 0.29
SOX1O00570 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.85■□□□□ 0.29
SOX1O00570 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 KRT18P25-201ENST00000508931 1278 ntBASIC16.85■□□□□ 0.29
SOX1O00570 AC005740.2-201ENST00000511085 419 ntBASIC16.85■□□□□ 0.29
SOX1O00570 AC116345.2-201ENST00000512837 523 ntBASIC16.85■□□□□ 0.29
SOX1O00570 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.85■□□□□ 0.29
SOX1O00570 AC103988.2-201ENST00000561804 725 ntBASIC16.85■□□□□ 0.29
SOX1O00570 RN7SL596P-201ENST00000582123 288 ntBASIC16.85■□□□□ 0.29
SOX1O00570 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 AP005019.2-201ENST00000615104 511 ntBASIC16.85■□□□□ 0.29
SOX1O00570 YRDCP1-201ENST00000621419 643 ntBASIC16.85■□□□□ 0.29
SOX1O00570 AC100757.4-201ENST00000626934 759 ntBASIC16.85■□□□□ 0.29
SOX1O00570 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 KRT8P35-201ENST00000483942 1338 ntBASIC16.85■□□□□ 0.29
SOX1O00570 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.85■□□□□ 0.29
SOX1O00570 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX1O00570 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX1O00570 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.84■□□□□ 0.29
SOX1O00570 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SOX1O00570 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.84■□□□□ 0.29
SOX1O00570 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SOX1O00570 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SOX1O00570 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.84■□□□□ 0.29
SOX1O00570 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 AL139008.1-201ENST00000437894 228 ntBASIC16.84■□□□□ 0.29
SOX1O00570 EEF1DP4-201ENST00000446006 880 ntBASIC16.84■□□□□ 0.29
SOX1O00570 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.84■□□□□ 0.29
SOX1O00570 AL022344.2-201ENST00000568976 968 ntBASIC16.84■□□□□ 0.29
SOX1O00570 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 MIR4321-201ENST00000592276 80 ntBASIC16.84■□□□□ 0.29
SOX1O00570 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.84■□□□□ 0.29
SOX1O00570 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.84■□□□□ 0.29
SOX1O00570 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.84■□□□□ 0.29
SOX1O00570 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 AL512652.2-201ENST00000625156 1716 ntBASIC16.84■□□□□ 0.29
SOX1O00570 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SOX1O00570 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX1O00570 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SOX1O00570 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms