Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 U82695.1-201ENST00000635752 1889 ntBASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AL589702.1-201ENST00000641229 1509 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AC092364.2-201ENST00000596710 2692 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 BANF1P1-201ENST00000553684 263 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AL079307.3-201ENST00000556114 283 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AL035252.4-201ENST00000624174 288 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AC124067.4-201ENST00000519691 2379 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 PCDHB19P-201ENST00000570871 2371 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 AC087499.5-201ENST00000452760 1342 ntBASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA3F8WFD2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA3F8WFD2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms