Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 TEX28P1-201ENST00000613479 1221 ntBASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 TEX28P2-201ENST00000617764 1221 ntBASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AC005622.1-201ENST00000636801 1703 ntBASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA2E9PIF3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 U82695.1-201ENST00000635752 1889 ntBASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPIPA2E9PIF3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AL589702.1-201ENST00000641229 1509 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AC092364.2-201ENST00000596710 2692 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms