Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 RPS8P6-201ENST00000426177 609 ntBASIC16.13■□□□□ 0.17
CFAP99D6REC4 DNAJB3-202ENST00000449667 1266 ntBASIC16.13■□□□□ 0.17
CFAP99D6REC4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 RNA5SP410-201ENST00000516285 106 ntBASIC16.13■□□□□ 0.17
CFAP99D6REC4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.13■□□□□ 0.17
CFAP99D6REC4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CFAP99D6REC4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.13■□□□□ 0.17
CFAP99D6REC4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 FAM220BP-201ENST00000377689 816 ntBASIC16.12■□□□□ 0.17
CFAP99D6REC4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 AC245100.5-201ENST00000452108 331 ntBASIC16.12■□□□□ 0.17
CFAP99D6REC4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 AC139530.3-201ENST00000620344 690 ntBASIC16.12■□□□□ 0.17
CFAP99D6REC4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
CFAP99D6REC4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.12■□□□□ 0.17
CFAP99D6REC4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CFAP99D6REC4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CFAP99D6REC4 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC16.11■□□□□ 0.17
CFAP99D6REC4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms