Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 AKR7A2P1-201ENST00000460134 915 ntBASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 AL021578.1-201ENST00000613646 709 ntBASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 AC005695.3-201ENST00000614522 232 ntBASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 AC244452.3-201ENST00000636814 210 ntBASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PLEKHD1A6NEE1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 MIR4741-201ENST00000579822 90 ntBASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PLEKHD1A6NEE1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 AL133267.1-201ENST00000398220 340 ntBASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 KRT18P25-201ENST00000508931 1278 ntBASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC24.36■■□□□ 1.49
PLEKHD1A6NEE1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 AC004898.1-201ENST00000451057 766 ntBASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 ACR-203ENST00000529621 708 ntTSL 5 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PLEKHD1A6NEE1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms