Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CNN2P2-201ENST00000443536 909 ntBASIC15.28■□□□□ 0.04
LRIT2A6NDA9 CNN2P3-201ENST00000450201 906 ntBASIC15.28■□□□□ 0.04
LRIT2A6NDA9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AL136317.3-201ENST00000618497 906 ntBASIC15.28■□□□□ 0.04
LRIT2A6NDA9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.28■□□□□ 0.04
LRIT2A6NDA9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 AL596257.1-201ENST00000641463 2694 ntBASIC15.28■□□□□ 0.04
LRIT2A6NDA9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRIT2A6NDA9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 REXO1L1P-202ENST00000608646 1974 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 KRT8P37-201ENST00000451609 1420 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 TUBB3P1-201ENST00000405796 1332 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 SPDYE17-201ENST00000412399 783 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 MTND6P24-201ENST00000440466 518 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 EEF1DP4-201ENST00000446006 880 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 AC093028.1-201ENST00000622998 982 ntBASIC15.27■□□□□ 0.04
LRIT2A6NDA9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT2A6NDA9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRIT2A6NDA9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRIT2A6NDA9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms