Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI2Q9Y5P3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 LINC02560-201ENST00000596379 459 ntBASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAI2Q9Y5P3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 AL691432.1-201ENST00000596308 1422 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 AL136982.4-201ENST00000437689 1740 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 AL035456.1-201ENST00000456064 1369 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 MIR943-201ENST00000401286 94 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 MTND6P24-201ENST00000440466 518 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 AC125807.1-201ENST00000483097 614 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 RN7SL828P-201ENST00000607615 303 ntBASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RAI2Q9Y5P3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms