Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AL365203.3-201ENST00000609742 2057 ntBASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 AL138918.1-201ENST00000568306 659 ntBASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 AC024267.1-201ENST00000582320 895 ntBASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 MIR4453-201ENST00000584019 89 ntBASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SPTSSB-204ENST00000617024 1292 ntBASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 AC069224.1-201ENST00000566372 1715 ntBASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB1Q9Y5F3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 AC004890.2-204ENST00000481968 304 ntBASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 MEIS3P1-201ENST00000495167 958 ntBASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 CDC14C-201ENST00000428251 1719 ntBASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB1Q9Y5F3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB1Q9Y5F3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms