Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 KRT17P8-201ENST00000540749 863 ntBASIC16.7■□□□□ 0.26
YIPF1Q9Y548 AC106886.1-201ENST00000568660 600 ntBASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 AL450472.2-201ENST00000603663 1156 ntBASIC16.7■□□□□ 0.26
YIPF1Q9Y548 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF1Q9Y548 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 AC136604.1-201ENST00000418535 575 ntBASIC16.69■□□□□ 0.26
YIPF1Q9Y548 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 MIR6752-201ENST00000618442 71 ntBASIC16.69■□□□□ 0.26
YIPF1Q9Y548 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YIPF1Q9Y548 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 RAB43P1-201ENST00000561790 589 ntBASIC16.68■□□□□ 0.26
YIPF1Q9Y548 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 AC017083.2-201ENST00000608069 979 ntBASIC16.68■□□□□ 0.26
YIPF1Q9Y548 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
YIPF1Q9Y548 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.67■□□□□ 0.26
YIPF1Q9Y548 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms