Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 LINC00628-201ENST00000628516 1289 ntBASIC15.12■□□□□ 0.01
CNIH4Q9P003 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AL645939.2-201ENST00000427340 991 ntBASIC15.11■□□□□ 0.01
CNIH4Q9P003 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AL512356.2-201ENST00000546955 174 ntBASIC15.11■□□□□ 0.01
CNIH4Q9P003 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AL138918.1-201ENST00000568306 659 ntBASIC15.11■□□□□ 0.01
CNIH4Q9P003 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 LINC01144-201ENST00000626198 1710 ntBASIC15.11■□□□□ 0.01
CNIH4Q9P003 AC011270.2-201ENST00000624293 2550 ntBASIC15.11■□□□□ 0.01
CNIH4Q9P003 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CNIH4Q9P003 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNIH4Q9P003 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNIH4Q9P003 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 AL139400.1-201ENST00000366220 510 ntBASIC15.1■□□□□ 0.01
CNIH4Q9P003 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CNIH4Q9P003 FAM58DP-201ENST00000428076 619 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms