Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 AC011477.6-201ENST00000604980 1927 ntBASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 AL049840.3-201ENST00000602669 611 ntBASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 Z83851.2-201ENST00000609564 659 ntBASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 AP003680.1-201ENST00000598970 3660 ntBASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD1Q9NXG2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AC099063.4-201ENST00000641099 1602 ntBASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AP001282.1-201ENST00000531301 1499 ntBASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD1Q9NXG2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 PMS2P7-201ENST00000506558 1336 ntBASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 AL136379.1-201ENST00000623471 2642 ntBASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 AC023157.3-201ENST00000619086 2088 ntBASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.18■□□□□ 0.02
THUMPD1Q9NXG2 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms