Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 OR7E47P-204ENST00000575924 449 ntBASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LIN7CQ9NUP9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 KRT18P3-201ENST00000451602 1288 ntBASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 AC140113.2-201ENST00000604370 208 ntBASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LIN7CQ9NUP9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
LIN7CQ9NUP9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AC007967.2-201ENST00000432613 625 ntBASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 FAM185BP-201ENST00000443595 716 ntBASIC13.45□□□□□ -0.26
LIN7CQ9NUP9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms